Package: drda 2.0.4
Alberto Pessia
drda: Dose-Response Data Analysis
Fit logistic functions to observed dose-response continuous data and evaluate goodness-of-fit measures. See Malyutina A., Tang J., and Pessia A. (2023) <doi:10.18637/jss.v106.i04>.
Authors:
drda_2.0.4.tar.gz
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drda.pdf |drda.html✨
drda/json (API)
NEWS
| # Install 'drda' in R: |
| install.packages('drda', repos = c('https://albertopessia.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/albertopessia/drda/issues
- voropm2 - Vorinostat in OPM-2 cell-line dataset
dose-responselogistic-function
Last updated 28 days agofrom:10856c64d2. Checks:OK: 7. Indexed: yes.
| Target | Result | Date |
|---|---|---|
| Doc / Vignettes | OK | Aug 21 2024 |
| R-4.5-win | OK | Aug 21 2024 |
| R-4.5-linux | OK | Aug 21 2024 |
| R-4.4-win | OK | Aug 21 2024 |
| R-4.4-mac | OK | Aug 21 2024 |
| R-4.3-win | OK | Aug 21 2024 |
| R-4.3-mac | OK | Aug 21 2024 |
Exports:drdaeffective_dosegompertz_fngompertz_gradientgompertz_gradient_2gompertz_gradient_hessiangompertz_gradient_hessian_2gompertz_hessiangompertz_hessian_2loggompertz_fnloggompertz_gradientloggompertz_gradient_2loggompertz_gradient_hessianloggompertz_gradient_hessian_2loggompertz_hessianloggompertz_hessian_2logistic2_fnlogistic2_gradientlogistic2_gradient_2logistic2_gradient_hessianlogistic2_gradient_hessian_2logistic2_hessianlogistic2_hessian_2logistic4_fnlogistic4_gradientlogistic4_gradient_2logistic4_gradient_hessianlogistic4_gradient_hessian_2logistic4_hessianlogistic4_hessian_2logistic5_fnlogistic5_gradientlogistic5_gradient_2logistic5_gradient_hessianlogistic5_gradient_hessian_2logistic5_hessianlogistic5_hessian_2logistic6_fnlogistic6_gradientlogistic6_gradient_2logistic6_gradient_hessianlogistic6_gradient_hessian_2logistic6_hessianlogistic6_hessian_2loglogistic2_fnloglogistic2_gradientloglogistic2_gradient_2loglogistic2_gradient_hessianloglogistic2_gradient_hessian_2loglogistic2_hessianloglogistic2_hessian_2loglogistic4_fnloglogistic4_gradientloglogistic4_gradient_2loglogistic4_gradient_hessianloglogistic4_gradient_hessian_2loglogistic4_hessianloglogistic4_hessian_2loglogistic5_fnloglogistic5_gradientloglogistic5_gradient_2loglogistic5_gradient_hessianloglogistic5_gradient_hessian_2loglogistic5_hessianloglogistic5_hessian_2loglogistic6_fnloglogistic6_gradientloglogistic6_gradient_2loglogistic6_gradient_hessianloglogistic6_gradient_hessian_2loglogistic6_hessianloglogistic6_hessian_2naacnauc
Dependencies:
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Fit non-linear growth curves | drda |
| Effective dose | effective_dose |
| Gompertz function | gompertz_fn |
| Gompertz function gradient and Hessian | gompertz_gradient gompertz_gradient_hessian gompertz_hessian |
| Gompertz function gradient and Hessian | gompertz_gradient_2 gompertz_gradient_hessian_2 gompertz_hessian_2 |
| log-Gompertz function | loggompertz_fn |
| Log-Gompertz function gradient and Hessian | loggompertz_gradient loggompertz_gradient_hessian loggompertz_hessian |
| Log-Gompertz function gradient and Hessian | loggompertz_gradient_2 loggompertz_gradient_hessian_2 loggompertz_hessian_2 |
| 2-parameter logistic function | logistic2_fn |
| 2-parameter logistic function gradient and Hessian | logistic2_gradient logistic2_gradient_hessian logistic2_hessian |
| 2-parameter logistic function gradient and Hessian | logistic2_gradient_2 logistic2_gradient_hessian_2 logistic2_hessian_2 |
| 4-parameter logistic function | logistic4_fn |
| 4-parameter logistic function gradient and Hessian | logistic4_gradient logistic4_gradient_hessian logistic4_hessian |
| 4-parameter logistic function gradient and Hessian | logistic4_gradient_2 logistic4_gradient_hessian_2 logistic4_hessian_2 |
| 5-parameter logistic function | logistic5_fn |
| 5-parameter logistic function gradient and Hessian | logistic5_gradient logistic5_gradient_hessian logistic5_hessian |
| 5-parameter logistic function gradient and Hessian | logistic5_gradient_2 logistic5_gradient_hessian_2 logistic5_hessian_2 |
| 6-parameter logistic function | logistic6_fn |
| 6-parameter logistic function gradient and Hessian | logistic6_gradient logistic6_gradient_hessian logistic6_hessian |
| 6-parameter logistic function gradient and Hessian | logistic6_gradient_2 logistic6_gradient_hessian_2 logistic6_hessian_2 |
| 2-parameter log-logistic function | loglogistic2_fn |
| 2-parameter log-logistic function gradient and Hessian | loglogistic2_gradient loglogistic2_gradient_hessian loglogistic2_hessian |
| 2-parameter log-logistic function gradient and Hessian | loglogistic2_gradient_2 loglogistic2_gradient_hessian_2 loglogistic2_hessian_2 |
| 4-parameter log-logistic function | loglogistic4_fn |
| 4-parameter log-logistic function gradient and Hessian | loglogistic4_gradient loglogistic4_gradient_hessian loglogistic4_hessian |
| 4-parameter log-logistic function gradient and Hessian | loglogistic4_gradient_2 loglogistic4_gradient_hessian_2 loglogistic4_hessian_2 |
| 5-parameter log-logistic function | loglogistic5_fn |
| 5-parameter log-logistic function gradient and Hessian | loglogistic5_gradient loglogistic5_gradient_hessian loglogistic5_hessian |
| 5-parameter log-logistic function gradient and Hessian | loglogistic5_gradient_2 loglogistic5_gradient_hessian_2 loglogistic5_hessian_2 |
| 6-parameter log-logistic function | loglogistic6_fn |
| 6-parameter log-logistic function gradient and Hessian | loglogistic6_gradient loglogistic6_gradient_hessian loglogistic6_hessian |
| 6-parameter log-logistic function gradient and Hessian | loglogistic6_gradient_2 loglogistic6_gradient_hessian_2 loglogistic6_hessian_2 |
| Area above the curve | naac |
| Area under the curve | nauc |
| Model fit plotting | plot.drda |
| Vorinostat in OPM-2 cell-line dataset | voropm2 |